STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR88957.1Hypothetical protein. (2227 aa)    
Predicted Functional Partners:
SDR89064.1
RHS repeat-associated core domain-containing protein.
 
    0.937
SDR89174.1
RHS repeat-associated core domain-containing protein.
 
    0.863
SDR89317.1
RHS repeat-associated core domain-containing protein.
 
    0.830
SDT36912.1
RHS repeat-associated core domain-containing protein.
 
    0.785
SDR89006.1
Hypothetical protein.
       0.773
SDR88854.1
Hypothetical protein.
 
     0.760
SDR89117.1
Hypothetical protein.
       0.718
SDR88900.1
Hypothetical protein.
       0.714
SDS50647.1
Competence protein CoiA.
  
     0.679
SDT69841.1
Hypothetical protein.
  
     0.676
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.