STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR93244.1Protein of unknown function. (154 aa)    
Predicted Functional Partners:
SDS56906.1
PDZ domain (Also known as DHR or GLGF).
  
     0.449
SDT64488.1
PDZ domain (Also known as DHR or GLGF).
  
     0.447
SDR93293.1
NHL repeat-containing protein.
       0.438
SDR90358.1
Hypothetical protein.
  
     0.437
SDS27113.1
Sodium/proton antiporter, CPA1 family.
  
     0.423
SDT60428.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.409
SDT61784.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.