Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDR89873.1 | SDT65634.1 | SAMN05216490_0156 | SAMN05216490_4643 | Rhomboid family protein. | Rhomboid-like protein. | 0.424 |
| SDR89873.1 | tatA | SAMN05216490_0156 | SAMN05216490_0373 | Rhomboid family protein. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.702 |
| SDR89873.1 | tatA-2 | SAMN05216490_0156 | SAMN05216490_0374 | Rhomboid family protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.741 |
| SDS00730.1 | SDS00935.1 | SAMN05216490_0368 | SAMN05216490_0372 | Membrane protein involved in the export of O-antigen and teichoic acid. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.671 |
| SDS00730.1 | tatA | SAMN05216490_0368 | SAMN05216490_0373 | Membrane protein involved in the export of O-antigen and teichoic acid. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.476 |
| SDS00730.1 | tatA-2 | SAMN05216490_0368 | SAMN05216490_0374 | Membrane protein involved in the export of O-antigen and teichoic acid. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.543 |
| SDS00935.1 | SDS00730.1 | SAMN05216490_0372 | SAMN05216490_0368 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.671 |
| SDS00935.1 | tatA | SAMN05216490_0372 | SAMN05216490_0373 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.645 |
| SDS00935.1 | tatA-2 | SAMN05216490_0372 | SAMN05216490_0374 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.565 |
| SDT09245.1 | tatA | SAMN05216490_2466 | SAMN05216490_0373 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.562 |
| SDT09245.1 | tatA-2 | SAMN05216490_2466 | SAMN05216490_0374 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.562 |
| SDT65634.1 | SDR89873.1 | SAMN05216490_4643 | SAMN05216490_0156 | Rhomboid-like protein. | Rhomboid family protein. | 0.424 |
| SDT65634.1 | SDT65655.1 | SAMN05216490_4643 | SAMN05216490_4644 | Rhomboid-like protein. | Membrane associated serine protease, rhomboid family. | 0.864 |
| SDT65634.1 | tatA | SAMN05216490_4643 | SAMN05216490_0373 | Rhomboid-like protein. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.702 |
| SDT65634.1 | tatA-2 | SAMN05216490_4643 | SAMN05216490_0374 | Rhomboid-like protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.702 |
| SDT65655.1 | SDT65634.1 | SAMN05216490_4644 | SAMN05216490_4643 | Membrane associated serine protease, rhomboid family. | Rhomboid-like protein. | 0.864 |
| SDT65655.1 | tatA | SAMN05216490_4644 | SAMN05216490_0373 | Membrane associated serine protease, rhomboid family. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.702 |
| SDT65655.1 | tatA-2 | SAMN05216490_4644 | SAMN05216490_0374 | Membrane associated serine protease, rhomboid family. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.736 |
| guaA | hisI | SAMN05216490_3629 | SAMN05216490_2929 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.479 |
| guaA | tatA | SAMN05216490_3629 | SAMN05216490_0373 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.963 |
page 1 of 3