Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS04989.1 | SDS05071.1 | SAMN05216490_0445 | SAMN05216490_0446 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.441 |
SDS04989.1 | SDS05195.1 | SAMN05216490_0445 | SAMN05216490_0448 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.402 |
SDS05071.1 | SDS04989.1 | SAMN05216490_0446 | SAMN05216490_0445 | Hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.441 |
SDS05071.1 | SDS05122.1 | SAMN05216490_0446 | SAMN05216490_0447 | Hypothetical protein. | Hypothetical protein. | 0.685 |
SDS05071.1 | SDS05195.1 | SAMN05216490_0446 | SAMN05216490_0448 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.685 |
SDS05071.1 | SDS05231.1 | SAMN05216490_0446 | SAMN05216490_0449 | Hypothetical protein. | Signal transduction histidine kinase. | 0.685 |
SDS05122.1 | SDS05071.1 | SAMN05216490_0447 | SAMN05216490_0446 | Hypothetical protein. | Hypothetical protein. | 0.685 |
SDS05122.1 | SDS05195.1 | SAMN05216490_0447 | SAMN05216490_0448 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.824 |
SDS05122.1 | SDS05231.1 | SAMN05216490_0447 | SAMN05216490_0449 | Hypothetical protein. | Signal transduction histidine kinase. | 0.936 |
SDS05195.1 | SDS04989.1 | SAMN05216490_0448 | SAMN05216490_0445 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.402 |
SDS05195.1 | SDS05071.1 | SAMN05216490_0448 | SAMN05216490_0446 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.685 |
SDS05195.1 | SDS05122.1 | SAMN05216490_0448 | SAMN05216490_0447 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.824 |
SDS05195.1 | SDS05231.1 | SAMN05216490_0448 | SAMN05216490_0449 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.987 |
SDS05231.1 | SDS05071.1 | SAMN05216490_0449 | SAMN05216490_0446 | Signal transduction histidine kinase. | Hypothetical protein. | 0.685 |
SDS05231.1 | SDS05122.1 | SAMN05216490_0449 | SAMN05216490_0447 | Signal transduction histidine kinase. | Hypothetical protein. | 0.936 |
SDS05231.1 | SDS05195.1 | SAMN05216490_0449 | SAMN05216490_0448 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.987 |