STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS14940.1TonB-linked outer membrane protein, SusC/RagA family. (1057 aa)    
Predicted Functional Partners:
SDS14892.1
Starch-binding associating with outer membrane.
 
     0.914
SDS14642.1
Starch-binding associating with outer membrane.
 
     0.855
SDS14545.1
GDSL-like Lipase/Acylhydrolase family protein.
 
     0.788
SDS14360.1
Ricin-type beta-trefoil lectin domain-like.
 
     0.781
SDS14433.1
Alpha-mannosidase.
 
     0.774
SDT34907.1
Starch-binding associating with outer membrane.
  
     0.751
SDS14834.1
TonB-linked outer membrane protein, SusC/RagA family.
 
   
0.740
SDS14224.1
Lysophospholipase L1.
  
     0.736
SDT34942.1
Starch-binding associating with outer membrane.
 
     0.724
SDT54692.1
TonB protein C-terminal.
  
   0.722
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.