STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS34712.1Hypothetical protein. (776 aa)    
Predicted Functional Partners:
SDS34657.1
alpha-N-arabinofuranosidase.
 
 
   0.875
SDS33789.1
Starch-binding associating with outer membrane.
 
 
   0.860
SDS92375.1
Right handed beta helix region.
  
 
   0.835
SDS92284.1
Starch-binding associating with outer membrane.
  
 
   0.831
SDS33884.1
Hypothetical protein.
 
     0.798
SDS34613.1
alpha-N-arabinofuranosidase.
 
 
   0.788
SDT35005.1
Hypothetical protein.
  
 
   0.745
SDS47401.1
Lysophospholipase L1.
  
 
   0.732
SDS33937.1
Hypothetical protein.
 
     0.713
SDS35267.1
Glycosyl hydrolases family 38 C-terminal domain-containing protein.
  
     0.712
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.