Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR82909.1 | SDS41057.1 | SAMN05216490_0017 | SAMN05216490_1105 | Calcineurin-like phosphoesterase. | 4-amino-4-deoxy-L-arabinose transferase. | 0.466 |
SDR85394.1 | SDS41057.1 | SAMN05216490_0065 | SAMN05216490_1105 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 4-amino-4-deoxy-L-arabinose transferase. | 0.410 |
SDR85394.1 | lpxK | SAMN05216490_0065 | SAMN05216490_3418 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.991 |
SDS26775.1 | SDS41057.1 | SAMN05216490_0847 | SAMN05216490_1105 | Hypothetical protein. | 4-amino-4-deoxy-L-arabinose transferase. | 0.415 |
SDS41012.1 | SDS41057.1 | SAMN05216490_1104 | SAMN05216490_1105 | Hypothetical protein. | 4-amino-4-deoxy-L-arabinose transferase. | 0.446 |
SDS41057.1 | SDR82909.1 | SAMN05216490_1105 | SAMN05216490_0017 | 4-amino-4-deoxy-L-arabinose transferase. | Calcineurin-like phosphoesterase. | 0.466 |
SDS41057.1 | SDR85394.1 | SAMN05216490_1105 | SAMN05216490_0065 | 4-amino-4-deoxy-L-arabinose transferase. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.410 |
SDS41057.1 | SDS26775.1 | SAMN05216490_1105 | SAMN05216490_0847 | 4-amino-4-deoxy-L-arabinose transferase. | Hypothetical protein. | 0.415 |
SDS41057.1 | SDS41012.1 | SAMN05216490_1105 | SAMN05216490_1104 | 4-amino-4-deoxy-L-arabinose transferase. | Hypothetical protein. | 0.446 |
SDS41057.1 | lpxK | SAMN05216490_1105 | SAMN05216490_3418 | 4-amino-4-deoxy-L-arabinose transferase. | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.482 |
lpxK | SDR85394.1 | SAMN05216490_3418 | SAMN05216490_0065 | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.991 |
lpxK | SDS41057.1 | SAMN05216490_3418 | SAMN05216490_1105 | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 4-amino-4-deoxy-L-arabinose transferase. | 0.482 |