Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR96864.1 | SDR97012.1 | SAMN05216490_0294 | SAMN05216490_0297 | NADH dehydrogenase subunit E. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.999 |
SDR96864.1 | SDR97129.1 | SAMN05216490_0294 | SAMN05216490_0299 | NADH dehydrogenase subunit E. | NADH dehydrogenase subunit G. | 0.999 |
SDR96864.1 | SDS01263.1 | SAMN05216490_0294 | SAMN05216490_0377 | NADH dehydrogenase subunit E. | Allosteric NADP-dependent malic enzyme. | 0.728 |
SDR96864.1 | SDS58785.1 | SAMN05216490_0294 | SAMN05216490_1425 | NADH dehydrogenase subunit E. | Acetyl esterase/lipase. | 0.812 |
SDR97012.1 | SDR96864.1 | SAMN05216490_0297 | SAMN05216490_0294 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH dehydrogenase subunit E. | 0.999 |
SDR97012.1 | SDR97129.1 | SAMN05216490_0297 | SAMN05216490_0299 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH dehydrogenase subunit G. | 0.999 |
SDR97012.1 | SDS01263.1 | SAMN05216490_0297 | SAMN05216490_0377 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Allosteric NADP-dependent malic enzyme. | 0.783 |
SDR97012.1 | SDS58785.1 | SAMN05216490_0297 | SAMN05216490_1425 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Acetyl esterase/lipase. | 0.817 |
SDR97129.1 | SDR96864.1 | SAMN05216490_0299 | SAMN05216490_0294 | NADH dehydrogenase subunit G. | NADH dehydrogenase subunit E. | 0.999 |
SDR97129.1 | SDR97012.1 | SAMN05216490_0299 | SAMN05216490_0297 | NADH dehydrogenase subunit G. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.999 |
SDR97129.1 | SDS01263.1 | SAMN05216490_0299 | SAMN05216490_0377 | NADH dehydrogenase subunit G. | Allosteric NADP-dependent malic enzyme. | 0.677 |
SDR97129.1 | SDS58785.1 | SAMN05216490_0299 | SAMN05216490_1425 | NADH dehydrogenase subunit G. | Acetyl esterase/lipase. | 0.816 |
SDS01263.1 | SDR96864.1 | SAMN05216490_0377 | SAMN05216490_0294 | Allosteric NADP-dependent malic enzyme. | NADH dehydrogenase subunit E. | 0.728 |
SDS01263.1 | SDR97012.1 | SAMN05216490_0377 | SAMN05216490_0297 | Allosteric NADP-dependent malic enzyme. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.783 |
SDS01263.1 | SDR97129.1 | SAMN05216490_0377 | SAMN05216490_0299 | Allosteric NADP-dependent malic enzyme. | NADH dehydrogenase subunit G. | 0.677 |
SDS01263.1 | SDS58785.1 | SAMN05216490_0377 | SAMN05216490_1425 | Allosteric NADP-dependent malic enzyme. | Acetyl esterase/lipase. | 0.686 |
SDS58785.1 | SDR96864.1 | SAMN05216490_1425 | SAMN05216490_0294 | Acetyl esterase/lipase. | NADH dehydrogenase subunit E. | 0.812 |
SDS58785.1 | SDR97012.1 | SAMN05216490_1425 | SAMN05216490_0297 | Acetyl esterase/lipase. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.817 |
SDS58785.1 | SDR97129.1 | SAMN05216490_1425 | SAMN05216490_0299 | Acetyl esterase/lipase. | NADH dehydrogenase subunit G. | 0.816 |
SDS58785.1 | SDS01263.1 | SAMN05216490_1425 | SAMN05216490_0377 | Acetyl esterase/lipase. | Allosteric NADP-dependent malic enzyme. | 0.686 |
page 1 of 3