Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS61124.1 | SDS61241.1 | SAMN05216490_1471 | SAMN05216490_1473 | Threonine/homoserine/homoserine lactone efflux protein. | dCMP deaminase. | 0.622 |
SDS61241.1 | SDS61124.1 | SAMN05216490_1473 | SAMN05216490_1471 | dCMP deaminase. | Threonine/homoserine/homoserine lactone efflux protein. | 0.622 |
SDS61241.1 | SDS70210.1 | SAMN05216490_1473 | SAMN05216490_1641 | dCMP deaminase. | Uridine kinase. | 0.578 |
SDS61241.1 | SDT23476.1 | SAMN05216490_1473 | SAMN05216490_2810 | dCMP deaminase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.872 |
SDS61241.1 | SDT27155.1 | SAMN05216490_1473 | SAMN05216490_2917 | dCMP deaminase. | Deoxyadenosine/deoxycytidine kinase. | 0.955 |
SDS61241.1 | SDT61536.1 | SAMN05216490_1473 | SAMN05216490_4342 | dCMP deaminase. | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | 0.539 |
SDS61241.1 | cmk | SAMN05216490_1473 | SAMN05216490_3582 | dCMP deaminase. | Cytidylate kinase. | 0.896 |
SDS61241.1 | dut | SAMN05216490_1473 | SAMN05216490_0369 | dCMP deaminase. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.917 |
SDS61241.1 | hisF | SAMN05216490_1473 | SAMN05216490_2927 | dCMP deaminase. | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.583 |
SDS61241.1 | tdk | SAMN05216490_1473 | SAMN05216490_0810 | dCMP deaminase. | Thymidine kinase. | 0.961 |
SDS61241.1 | thyA | SAMN05216490_1473 | SAMN05216490_2768 | dCMP deaminase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.927 |
SDS70210.1 | SDS61241.1 | SAMN05216490_1641 | SAMN05216490_1473 | Uridine kinase. | dCMP deaminase. | 0.578 |
SDS70210.1 | SDT23476.1 | SAMN05216490_1641 | SAMN05216490_2810 | Uridine kinase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.892 |
SDS70210.1 | cmk | SAMN05216490_1641 | SAMN05216490_3582 | Uridine kinase. | Cytidylate kinase. | 0.919 |
SDS70210.1 | tdk | SAMN05216490_1641 | SAMN05216490_0810 | Uridine kinase. | Thymidine kinase. | 0.659 |
SDT23476.1 | SDS61241.1 | SAMN05216490_2810 | SAMN05216490_1473 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | dCMP deaminase. | 0.872 |
SDT23476.1 | SDS70210.1 | SAMN05216490_2810 | SAMN05216490_1641 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uridine kinase. | 0.892 |
SDT23476.1 | SDT27155.1 | SAMN05216490_2810 | SAMN05216490_2917 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Deoxyadenosine/deoxycytidine kinase. | 0.871 |
SDT23476.1 | SDT61536.1 | SAMN05216490_2810 | SAMN05216490_4342 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | 0.411 |
SDT23476.1 | dut | SAMN05216490_2810 | SAMN05216490_0369 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.885 |
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