STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS84509.1Hypothetical protein. (757 aa)    
Predicted Functional Partners:
SDS84435.1
Histidine kinase.
 
     0.794
SDS84473.1
Two component transcriptional regulator, LytTR family.
 
     0.722
SDT69786.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.636
SDT45239.1
Micrococcal nuclease.
  
     0.550
SDS09736.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.547
SDS84574.1
Lysophospholipase L1.
       0.465
SDS93296.1
AraC-type DNA-binding protein.
  
     0.443
SDS84621.1
Alpha-galactosidase.
       0.421
SDT35456.1
ABC-2 type transport system permease protein.
 
     0.418
SDS84392.1
Hypothetical protein.
       0.417
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.