Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS00387.1 | SDS54517.1 | SAMN05216490_0362 | SAMN05216490_1352 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDS00387.1 | SDS63025.1 | SAMN05216490_0362 | SAMN05216490_1506 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDS00387.1 | SDS87102.1 | SAMN05216490_0362 | SAMN05216490_1986 | PAS domain S-box-containing protein. | Regulatory protein, luxR family. | 0.890 |
SDS00387.1 | SDS87568.1 | SAMN05216490_0362 | SAMN05216490_1996 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDS00387.1 | SDS87738.1 | SAMN05216490_0362 | SAMN05216490_1999 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDS00387.1 | SDT11745.1 | SAMN05216490_0362 | SAMN05216490_2525 | PAS domain S-box-containing protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.764 |
SDS00387.1 | SDT27243.1 | SAMN05216490_0362 | SAMN05216490_2920 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDS00387.1 | SDT45733.1 | SAMN05216490_0362 | SAMN05216490_3552 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDS00387.1 | SDT50176.1 | SAMN05216490_0362 | SAMN05216490_3757 | PAS domain S-box-containing protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.999 |
SDS00387.1 | SDT66204.1 | SAMN05216490_0362 | SAMN05216490_4686 | PAS domain S-box-containing protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.764 |
SDS54517.1 | SDS00387.1 | SAMN05216490_1352 | SAMN05216490_0362 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDS54517.1 | SDS63025.1 | SAMN05216490_1352 | SAMN05216490_1506 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDS54517.1 | SDS87102.1 | SAMN05216490_1352 | SAMN05216490_1986 | Signal transduction histidine kinase. | Regulatory protein, luxR family. | 0.829 |
SDS54517.1 | SDS87568.1 | SAMN05216490_1352 | SAMN05216490_1996 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDS54517.1 | SDS87738.1 | SAMN05216490_1352 | SAMN05216490_1999 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDS54517.1 | SDT11745.1 | SAMN05216490_1352 | SAMN05216490_2525 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.663 |
SDS54517.1 | SDT27243.1 | SAMN05216490_1352 | SAMN05216490_2920 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDS54517.1 | SDT45733.1 | SAMN05216490_1352 | SAMN05216490_3552 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDS54517.1 | SDT50176.1 | SAMN05216490_1352 | SAMN05216490_3757 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.999 |
SDS54517.1 | SDT66204.1 | SAMN05216490_1352 | SAMN05216490_4686 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.663 |
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