STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS95360.1Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. (594 aa)    
Predicted Functional Partners:
SDS95427.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
 
  
 0.961
SDT69388.1
Glycosidase.
 
  
 0.545
SDS39256.1
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
    
 0.528
SDS24701.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.520
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.520
SDT23025.1
Mechanosensitive ion channel.
 
    0.475
SDS59869.1
Alpha amylase, catalytic domain.
    
 0.472
SDT41147.1
Glycosidase.
    
 0.472
SDT63763.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
 0.472
SDT08593.1
Alpha,alpha-trehalase.
    
  0.411
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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