STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT12593.1Baseplate J-like protein. (1251 aa)    
Predicted Functional Partners:
SDT58189.1
Rhs element Vgr protein.
 
 
   0.999
SDT12720.1
Hypothetical protein.
 
 
 0.997
SDT12511.1
Hypothetical protein.
 
 
 
 0.996
SDT12861.1
Hypothetical protein.
 
 
 0.996
SDT58146.1
Hypothetical protein.
 
 
 0.990
SDT58207.1
Hypothetical protein.
 
 
 0.990
SDT13084.1
Hypothetical protein.
 
 
 0.989
SDT58106.1
Hypothetical protein.
 
 
 
 0.988
SDT12943.1
Conserved hypothetical phage tail region protein.
 
 
 
 0.982
SDT12993.1
Conserved hypothetical phage tail region protein.
 
 
 
 0.981
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.