STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT16215.1Pectinesterase. (331 aa)    
Predicted Functional Partners:
SDT16201.1
Pectate lyase superfamily protein; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.962
SDT17775.1
Hypothetical protein.
  
 0.944
SDT17153.1
Hypothetical protein.
  
 0.940
SDR88498.1
Lysophospholipase L1.
  
 0.934
SDT16345.1
Unsaturated rhamnogalacturonyl hydrolase.
 
    0.934
SDT40105.1
Pectate lyase superfamily protein; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.836
SDR88438.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.827
SDT16272.1
Tagaturonate reductase.
 
     0.820
SDT16306.1
Altronate hydrolase.
 
     0.814
SDS54700.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.813
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.