STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT19008.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
SDT19071.1
Starch-binding associating with outer membrane.
 
  
  0.949
SDT19108.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.916
SDT50989.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.875
SDT63106.1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
   
 0.834
SDS11798.1
Starch-binding associating with outer membrane.
 
  
  0.786
SDS19124.1
Starch-binding associating with outer membrane.
 
  
  0.769
SDT44311.1
Starch-binding associating with outer membrane.
 
  
  0.767
SDT04320.1
Starch-binding associating with outer membrane.
 
  
  0.764
SDS48930.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
   
 0.752
SDS09526.1
Cytochrome c, mono-and diheme variants.
   
 0.729
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.