STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT19628.1Sugar phosphate isomerase/epimerase. (351 aa)    
Predicted Functional Partners:
SDT19682.1
Predicted dehydrogenase.
 
 
 0.974
SDT19590.1
Cytochrome c.
       0.799
SDT15282.1
Choline dehydrogenase.
 
     0.754
SDS80671.1
Predicted dehydrogenase.
 
 
 0.719
SDT19547.1
Protein of unknown function.
 
     0.683
SDT18712.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
  
  0.637
SDS68411.1
Sugar phosphate isomerase/epimerase.
 
     0.605
SDS80717.1
Sugar phosphate isomerase/epimerase.
 
     0.603
SDT15231.1
Gluconate 2-dehydrogenase subunit 3.
 
     0.524
SDS80642.1
Sugar phosphate isomerase/epimerase.
 
     0.518
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.