STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT22172.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (459 aa)    
Predicted Functional Partners:
SDT45733.1
Signal transduction histidine kinase.
 
 0.952
SDT62759.1
HAMP domain-containing protein.
 
 0.947
SDS43663.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.933
SDS60615.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.933
SDT30106.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
  0.921
SDS00387.1
PAS domain S-box-containing protein.
 
 0.839
SDT39560.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
  
 0.838
SDS63025.1
Signal transduction histidine kinase.
 
 0.827
SDS87568.1
Signal transduction histidine kinase.
  
0.822
SDS87738.1
PAS domain S-box-containing protein.
 
 0.807
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.