STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT23367.1Hypothetical protein. (319 aa)    
Predicted Functional Partners:
SDT23410.1
Aspartyl/Asparaginyl beta-hydroxylase.
 
     0.957
SDT23442.1
Hypothetical protein.
 
     0.868
SDT23476.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
       0.752
SDT69841.1
Hypothetical protein.
  
     0.588
SDT23557.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.584
SDT23512.1
Microcystin-dependent protein.
 
     0.578
SDR88957.1
Hypothetical protein.
  
    0.575
SDT56974.1
AraC-type DNA-binding protein.
  
   0.556
SDT36885.1
Hypothetical protein.
  
    0.541
SDT36912.1
RHS repeat-associated core domain-containing protein.
  
     0.519
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.