Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR91696.1 | SDS41531.1 | SAMN05216490_0194 | SAMN05216490_1113 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin; Belongs to the thioredoxin family. | 0.599 |
SDR91696.1 | SDT26497.1 | SAMN05216490_0194 | SAMN05216490_2897 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin reductase (NADPH). | 0.800 |
SDR91696.1 | SDT45764.1 | SAMN05216490_0194 | SAMN05216490_3553 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin. | 0.599 |
SDR91696.1 | SDT64328.1 | SAMN05216490_0194 | SAMN05216490_4540 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Bacillithiol system protein YtxJ. | 0.549 |
SDS41531.1 | SDR91696.1 | SAMN05216490_1113 | SAMN05216490_0194 | Thioredoxin; Belongs to the thioredoxin family. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.599 |
SDS41531.1 | SDT09201.1 | SAMN05216490_1113 | SAMN05216490_2465 | Thioredoxin; Belongs to the thioredoxin family. | 1-Cys peroxiredoxin. | 0.599 |
SDS41531.1 | SDT20611.1 | SAMN05216490_1113 | SAMN05216490_2734 | Thioredoxin; Belongs to the thioredoxin family. | Glutamate synthase (NADH) large subunit. | 0.829 |
SDS41531.1 | SDT26497.1 | SAMN05216490_1113 | SAMN05216490_2897 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin reductase (NADPH). | 0.953 |
SDT09201.1 | SDS41531.1 | SAMN05216490_2465 | SAMN05216490_1113 | 1-Cys peroxiredoxin. | Thioredoxin; Belongs to the thioredoxin family. | 0.599 |
SDT09201.1 | SDT26497.1 | SAMN05216490_2465 | SAMN05216490_2897 | 1-Cys peroxiredoxin. | Thioredoxin reductase (NADPH). | 0.800 |
SDT09201.1 | SDT45764.1 | SAMN05216490_2465 | SAMN05216490_3553 | 1-Cys peroxiredoxin. | Thioredoxin. | 0.599 |
SDT09201.1 | SDT64328.1 | SAMN05216490_2465 | SAMN05216490_4540 | 1-Cys peroxiredoxin. | Bacillithiol system protein YtxJ. | 0.549 |
SDT20611.1 | SDS41531.1 | SAMN05216490_2734 | SAMN05216490_1113 | Glutamate synthase (NADH) large subunit. | Thioredoxin; Belongs to the thioredoxin family. | 0.829 |
SDT20611.1 | SDT26497.1 | SAMN05216490_2734 | SAMN05216490_2897 | Glutamate synthase (NADH) large subunit. | Thioredoxin reductase (NADPH). | 0.784 |
SDT20611.1 | SDT45764.1 | SAMN05216490_2734 | SAMN05216490_3553 | Glutamate synthase (NADH) large subunit. | Thioredoxin. | 0.829 |
SDT20611.1 | SDT56655.1 | SAMN05216490_2734 | SAMN05216490_4077 | Glutamate synthase (NADH) large subunit. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.960 |
SDT20611.1 | SDT64328.1 | SAMN05216490_2734 | SAMN05216490_4540 | Glutamate synthase (NADH) large subunit. | Bacillithiol system protein YtxJ. | 0.762 |
SDT24401.1 | SDT26497.1 | SAMN05216490_2836 | SAMN05216490_2897 | Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | Thioredoxin reductase (NADPH). | 0.872 |
SDT24401.1 | SDT58407.1 | SAMN05216490_2836 | SAMN05216490_4165 | Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | Selenocysteine lyase/Cysteine desulfurase. | 0.687 |
SDT26497.1 | SDR91696.1 | SAMN05216490_2897 | SAMN05216490_0194 | Thioredoxin reductase (NADPH). | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.800 |
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