Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS22752.1 | SDS33221.1 | SAMN05216490_0773 | SAMN05216490_0964 | Acetylornithine deacetylase. | Argininosuccinate lyase. | 0.831 |
SDS22752.1 | SDS41875.1 | SAMN05216490_0773 | SAMN05216490_1119 | Acetylornithine deacetylase. | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.679 |
SDS22752.1 | SDT26532.1 | SAMN05216490_0773 | SAMN05216490_2898 | Acetylornithine deacetylase. | Hypothetical protein. | 0.859 |
SDS22752.1 | SDT26567.1 | SAMN05216490_0773 | SAMN05216490_2899 | Acetylornithine deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.951 |
SDS22752.1 | SDT26668.1 | SAMN05216490_0773 | SAMN05216490_2902 | Acetylornithine deacetylase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.953 |
SDS22752.1 | SDT26678.1 | SAMN05216490_0773 | SAMN05216490_2903 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.944 |
SDS22752.1 | argB | SAMN05216490_0773 | SAMN05216490_2909 | Acetylornithine deacetylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.888 |
SDS22752.1 | argC | SAMN05216490_0773 | SAMN05216490_2901 | Acetylornithine deacetylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.922 |
SDS33124.1 | SDS33221.1 | SAMN05216490_0962 | SAMN05216490_0964 | Acetylornithine deacetylase. | Argininosuccinate lyase. | 0.876 |
SDS33124.1 | SDS41875.1 | SAMN05216490_0962 | SAMN05216490_1119 | Acetylornithine deacetylase. | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.679 |
SDS33124.1 | SDT26532.1 | SAMN05216490_0962 | SAMN05216490_2898 | Acetylornithine deacetylase. | Hypothetical protein. | 0.859 |
SDS33124.1 | SDT26567.1 | SAMN05216490_0962 | SAMN05216490_2899 | Acetylornithine deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.985 |
SDS33124.1 | SDT26668.1 | SAMN05216490_0962 | SAMN05216490_2902 | Acetylornithine deacetylase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.986 |
SDS33124.1 | SDT26678.1 | SAMN05216490_0962 | SAMN05216490_2903 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.944 |
SDS33124.1 | argB | SAMN05216490_0962 | SAMN05216490_2909 | Acetylornithine deacetylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.889 |
SDS33124.1 | argC | SAMN05216490_0962 | SAMN05216490_2901 | Acetylornithine deacetylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.922 |
SDS33221.1 | SDS22752.1 | SAMN05216490_0964 | SAMN05216490_0773 | Argininosuccinate lyase. | Acetylornithine deacetylase. | 0.831 |
SDS33221.1 | SDS33124.1 | SAMN05216490_0964 | SAMN05216490_0962 | Argininosuccinate lyase. | Acetylornithine deacetylase. | 0.876 |
SDS33221.1 | SDS41875.1 | SAMN05216490_0964 | SAMN05216490_1119 | Argininosuccinate lyase. | Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.863 |
SDS33221.1 | SDT26532.1 | SAMN05216490_0964 | SAMN05216490_2898 | Argininosuccinate lyase. | Hypothetical protein. | 0.874 |
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