Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR86275.1 | SDR90002.1 | SAMN05216490_0082 | SAMN05216490_0158 | Protocatechuate 3,4-dioxygenase beta subunit. | L-alanine-DL-glutamate epimerase. | 0.492 |
SDR86275.1 | SDT28455.1 | SAMN05216490_0082 | SAMN05216490_2957 | Protocatechuate 3,4-dioxygenase beta subunit. | L-alanine-DL-glutamate epimerase. | 0.492 |
SDR90002.1 | SDR86275.1 | SAMN05216490_0158 | SAMN05216490_0082 | L-alanine-DL-glutamate epimerase. | Protocatechuate 3,4-dioxygenase beta subunit. | 0.492 |
SDR90002.1 | SDS12549.1 | SAMN05216490_0158 | SAMN05216490_0586 | L-alanine-DL-glutamate epimerase. | Proline racemase; Belongs to the proline racemase family. | 0.402 |
SDR90002.1 | SDS39371.1 | SAMN05216490_0158 | SAMN05216490_1074 | L-alanine-DL-glutamate epimerase. | Por secretion system C-terminal sorting domain-containing protein. | 0.431 |
SDR90002.1 | SDS98512.1 | SAMN05216490_0158 | SAMN05216490_2234 | L-alanine-DL-glutamate epimerase. | L-fuconolactonase. | 0.428 |
SDR90002.1 | SDT16272.1 | SAMN05216490_0158 | SAMN05216490_2627 | L-alanine-DL-glutamate epimerase. | Tagaturonate reductase. | 0.429 |
SDR90002.1 | SDT16306.1 | SAMN05216490_0158 | SAMN05216490_2628 | L-alanine-DL-glutamate epimerase. | Altronate hydrolase. | 0.431 |
SDR90002.1 | SDT28455.1 | SAMN05216490_0158 | SAMN05216490_2957 | L-alanine-DL-glutamate epimerase. | L-alanine-DL-glutamate epimerase. | 0.520 |
SDS12549.1 | SDR90002.1 | SAMN05216490_0586 | SAMN05216490_0158 | Proline racemase; Belongs to the proline racemase family. | L-alanine-DL-glutamate epimerase. | 0.402 |
SDS12549.1 | SDT28455.1 | SAMN05216490_0586 | SAMN05216490_2957 | Proline racemase; Belongs to the proline racemase family. | L-alanine-DL-glutamate epimerase. | 0.402 |
SDS39371.1 | SDR90002.1 | SAMN05216490_1074 | SAMN05216490_0158 | Por secretion system C-terminal sorting domain-containing protein. | L-alanine-DL-glutamate epimerase. | 0.431 |
SDS39371.1 | SDT28455.1 | SAMN05216490_1074 | SAMN05216490_2957 | Por secretion system C-terminal sorting domain-containing protein. | L-alanine-DL-glutamate epimerase. | 0.403 |
SDS98512.1 | SDR90002.1 | SAMN05216490_2234 | SAMN05216490_0158 | L-fuconolactonase. | L-alanine-DL-glutamate epimerase. | 0.428 |
SDS98512.1 | SDT16306.1 | SAMN05216490_2234 | SAMN05216490_2628 | L-fuconolactonase. | Altronate hydrolase. | 0.617 |
SDS98512.1 | SDT28455.1 | SAMN05216490_2234 | SAMN05216490_2957 | L-fuconolactonase. | L-alanine-DL-glutamate epimerase. | 0.456 |
SDT16272.1 | SDR90002.1 | SAMN05216490_2627 | SAMN05216490_0158 | Tagaturonate reductase. | L-alanine-DL-glutamate epimerase. | 0.429 |
SDT16272.1 | SDT16306.1 | SAMN05216490_2627 | SAMN05216490_2628 | Tagaturonate reductase. | Altronate hydrolase. | 0.997 |
SDT16272.1 | SDT28455.1 | SAMN05216490_2627 | SAMN05216490_2957 | Tagaturonate reductase. | L-alanine-DL-glutamate epimerase. | 0.429 |
SDT16306.1 | SDR90002.1 | SAMN05216490_2628 | SAMN05216490_0158 | Altronate hydrolase. | L-alanine-DL-glutamate epimerase. | 0.431 |
page 1 of 2