STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT28455.1L-alanine-DL-glutamate epimerase. (369 aa)    
Predicted Functional Partners:
SDR90002.1
L-alanine-DL-glutamate epimerase.
  
  
 
0.520
SDR86275.1
Protocatechuate 3,4-dioxygenase beta subunit.
  
 
 0.492
SDS98512.1
L-fuconolactonase.
    
 0.456
SDT16306.1
Altronate hydrolase.
    
 0.431
SDT16272.1
Tagaturonate reductase.
    
 0.429
SDS39371.1
Por secretion system C-terminal sorting domain-containing protein.
 
  
 0.403
SDS12549.1
Proline racemase; Belongs to the proline racemase family.
     
 0.402
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
Server load: low (20%) [HD]