STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT35307.1Iron complex outermembrane recepter protein. (1218 aa)    
Predicted Functional Partners:
SDT35340.1
Starch-binding associating with outer membrane.
 
     0.932
SDS12396.1
Starch-binding associating with outer membrane.
  
     0.703
SDT15623.1
Starch-binding associating with outer membrane.
  
     0.647
SDT19977.1
Starch-binding associating with outer membrane.
  
     0.641
SDR88294.1
Starch-binding associating with outer membrane.
  
     0.625
SDT25893.1
TonB family C-terminal domain-containing protein.
 
   0.594
SDT49742.1
TonB protein C-terminal.
  
   0.592
SDT09950.1
TonB family C-terminal domain-containing protein.
  
   0.573
SDT57808.1
Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.573
SDS55372.1
Starch-binding associating with outer membrane.
  
     0.568
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.