Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS70296.1 | SDT54541.1 | SAMN05216490_1643 | SAMN05216490_3974 | Protein of unknown function. | Hypothetical protein. | 0.472 |
SDS70296.1 | SDT54558.1 | SAMN05216490_1643 | SAMN05216490_3975 | Protein of unknown function. | Uncharacterized membrane protein YckC, RDD family. | 0.429 |
SDT46278.1 | SDT54558.1 | SAMN05216490_3574 | SAMN05216490_3975 | Ribosome-associated heat shock protein Hsp15. | Uncharacterized membrane protein YckC, RDD family. | 0.521 |
SDT54504.1 | SDT54524.1 | SAMN05216490_3972 | SAMN05216490_3973 | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Phage shock protein C (PspC) family protein. | 0.805 |
SDT54504.1 | SDT54541.1 | SAMN05216490_3972 | SAMN05216490_3974 | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.734 |
SDT54504.1 | SDT54558.1 | SAMN05216490_3972 | SAMN05216490_3975 | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Uncharacterized membrane protein YckC, RDD family. | 0.593 |
SDT54524.1 | SDT54504.1 | SAMN05216490_3973 | SAMN05216490_3972 | Phage shock protein C (PspC) family protein. | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.805 |
SDT54524.1 | SDT54541.1 | SAMN05216490_3973 | SAMN05216490_3974 | Phage shock protein C (PspC) family protein. | Hypothetical protein. | 0.901 |
SDT54524.1 | SDT54558.1 | SAMN05216490_3973 | SAMN05216490_3975 | Phage shock protein C (PspC) family protein. | Uncharacterized membrane protein YckC, RDD family. | 0.701 |
SDT54524.1 | SDT54577.1 | SAMN05216490_3973 | SAMN05216490_3976 | Phage shock protein C (PspC) family protein. | Hypothetical protein. | 0.401 |
SDT54524.1 | SDT54601.1 | SAMN05216490_3973 | SAMN05216490_3977 | Phage shock protein C (PspC) family protein. | Toxin YoeB. | 0.401 |
SDT54524.1 | ispG | SAMN05216490_3973 | SAMN05216490_3978 | Phage shock protein C (PspC) family protein. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.403 |
SDT54541.1 | SDS70296.1 | SAMN05216490_3974 | SAMN05216490_1643 | Hypothetical protein. | Protein of unknown function. | 0.472 |
SDT54541.1 | SDT54504.1 | SAMN05216490_3974 | SAMN05216490_3972 | Hypothetical protein. | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.734 |
SDT54541.1 | SDT54524.1 | SAMN05216490_3974 | SAMN05216490_3973 | Hypothetical protein. | Phage shock protein C (PspC) family protein. | 0.901 |
SDT54541.1 | SDT54558.1 | SAMN05216490_3974 | SAMN05216490_3975 | Hypothetical protein. | Uncharacterized membrane protein YckC, RDD family. | 0.665 |
SDT54541.1 | SDT54577.1 | SAMN05216490_3974 | SAMN05216490_3976 | Hypothetical protein. | Hypothetical protein. | 0.401 |
SDT54541.1 | SDT54601.1 | SAMN05216490_3974 | SAMN05216490_3977 | Hypothetical protein. | Toxin YoeB. | 0.401 |
SDT54541.1 | SDT61034.1 | SAMN05216490_3974 | SAMN05216490_4313 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.405 |
SDT54558.1 | SDS70296.1 | SAMN05216490_3975 | SAMN05216490_1643 | Uncharacterized membrane protein YckC, RDD family. | Protein of unknown function. | 0.429 |
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