STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT62216.1Two component transcriptional regulator, LytTR family. (254 aa)    
Predicted Functional Partners:
SDT62229.1
Histidine kinase.
 
  0.984
SDT63282.1
Histidine kinase.
  
  0.930
SDS56786.1
Histidine kinase.
  
  0.867
SDT32348.1
Histidine kinase.
  
  0.867
SDT57321.1
Histidine kinase.
  
  0.867
SDR95863.1
Histidine kinase.
  
  0.866
SDS84435.1
Histidine kinase.
  
  0.866
SDS52669.1
Histidine kinase.
  
  0.865
SDS73566.1
Histidine kinase.
  
  0.865
SDS98816.1
Histidine kinase.
  
  0.865
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.