STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT63802.1Iron complex outermembrane recepter protein. (1024 aa)    
Predicted Functional Partners:
SDT63788.1
Starch-binding associating with outer membrane.
 
     0.929
SDT63775.1
SusE outer membrane protein.
 
     0.881
SDT63763.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
 
     0.803
SDT25239.1
RagB/SusD domain-containing protein.
  
 
   0.797
SDS59770.1
Protein of unknown function.
 
     0.776
SDS59702.1
Starch-binding associating with outer membrane.
 
     0.775
SDT58701.1
Starch-binding associating with outer membrane.
  
 
   0.740
SDT35511.1
RagB/SusD domain-containing protein.
  
 
   0.734
SDS69185.1
Starch-binding associating with outer membrane.
  
 
   0.732
SDT34722.1
Starch-binding associating with outer membrane.
  
 
   0.640
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.