STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT64747.1Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily. (170 aa)    
Predicted Functional Partners:
SDS22702.1
Carbonic anhydrase.
    
 0.820
SDT41482.1
Carbonic anhydrase.
    
 0.820
SDT63677.1
Carbonic anhydrase.
    
 0.820
SDS65084.1
Glyoxylase I family protein.
 
    0.695
SDT64774.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.635
SDS41531.1
Thioredoxin; Belongs to the thioredoxin family.
    
   0.481
SDT45764.1
Thioredoxin.
    
   0.481
SDT64763.1
Hypothetical protein.
       0.470
SDT64328.1
Bacillithiol system protein YtxJ.
    
   0.461
SDT46897.1
CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.445
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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