Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS95524.1 | SDT67679.1 | SAMN05216490_2169 | SAMN05216490_4820 | Glucose 1-dehydrogenase. | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.473 |
SDT08771.1 | SDT67679.1 | SAMN05216490_2455 | SAMN05216490_4820 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.608 |
SDT67662.1 | SDT67672.1 | SAMN05216490_4818 | SAMN05216490_4819 | Hypothetical protein. | Surface antigen. | 0.615 |
SDT67662.1 | SDT67679.1 | SAMN05216490_4818 | SAMN05216490_4820 | Hypothetical protein. | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.402 |
SDT67672.1 | SDT67662.1 | SAMN05216490_4819 | SAMN05216490_4818 | Surface antigen. | Hypothetical protein. | 0.615 |
SDT67672.1 | SDT67679.1 | SAMN05216490_4819 | SAMN05216490_4820 | Surface antigen. | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.491 |
SDT67679.1 | SDS95524.1 | SAMN05216490_4820 | SAMN05216490_2169 | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glucose 1-dehydrogenase. | 0.473 |
SDT67679.1 | SDT08771.1 | SAMN05216490_4820 | SAMN05216490_2455 | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.608 |
SDT67679.1 | SDT67662.1 | SAMN05216490_4820 | SAMN05216490_4818 | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.402 |
SDT67679.1 | SDT67672.1 | SAMN05216490_4820 | SAMN05216490_4819 | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Surface antigen. | 0.491 |
SDT67679.1 | SDT69318.1 | SAMN05216490_4820 | SAMN05216490_5007 | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.642 |
SDT69318.1 | SDT67679.1 | SAMN05216490_5007 | SAMN05216490_4820 | 3-oxoacyl-[acyl-carrier protein] reductase. | Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.642 |