STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT68599.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
SDT68591.1
Protein kinase domain-containing protein.
       0.773
SDT68624.1
SusD family protein.
  
     0.690
SDT68554.1
RteC protein.
  
     0.623
SDT35511.1
RagB/SusD domain-containing protein.
  
     0.617
SDR83102.1
Hypothetical protein.
  
     0.563
SDT68845.1
Phage integrase SAM-like domain-containing protein.
  
     0.561
SDR83606.1
Helix-turn-helix domain-containing protein.
  
     0.558
SDT68632.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.554
SDT35540.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.534
SDT68607.1
Hypothetical protein.
       0.516
Your Current Organism:
Mucilaginibacter mallensis
NCBI taxonomy Id: 652787
Other names: LMG 25360, LMG:25360, M. mallensis, Mucilaginibacter mallensis Mannisto et al. 2010, Mucilaginibacter sp. MP1X4, strain MP1X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.