Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHM89738.1 | EHM93203.1 | HMPREF0975_02931 | HMPREF0975_02006 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.527 |
EHM89738.1 | EHM93262.1 | HMPREF0975_02931 | HMPREF0975_01999 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.415 |
EHM89738.1 | EHM95748.1 | HMPREF0975_02931 | HMPREF0975_00199 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.610 |
EHM89738.1 | EHM95750.1 | HMPREF0975_02931 | HMPREF0975_00201 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.811 |
EHM89738.1 | EHM95896.1 | HMPREF0975_02931 | HMPREF0975_00057 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.415 |
EHM90033.1 | EHM93203.1 | HMPREF0975_02897 | HMPREF0975_02006 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.507 |
EHM90033.1 | EHM93262.1 | HMPREF0975_02897 | HMPREF0975_01999 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.415 |
EHM90033.1 | EHM95748.1 | HMPREF0975_02897 | HMPREF0975_00199 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.589 |
EHM90033.1 | EHM95750.1 | HMPREF0975_02897 | HMPREF0975_00201 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.809 |
EHM90033.1 | EHM95896.1 | HMPREF0975_02897 | HMPREF0975_00057 | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.415 |
EHM90622.1 | EHM93203.1 | HMPREF0975_02746 | HMPREF0975_02006 | Hypothetical protein. | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.852 |
EHM90622.1 | EHM93262.1 | HMPREF0975_02746 | HMPREF0975_01999 | Hypothetical protein. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.896 |
EHM90622.1 | EHM95750.1 | HMPREF0975_02746 | HMPREF0975_00201 | Hypothetical protein. | Hypothetical protein. | 0.842 |
EHM90622.1 | EHM95896.1 | HMPREF0975_02746 | HMPREF0975_00057 | Hypothetical protein. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.896 |
EHM90622.1 | murA | HMPREF0975_02746 | HMPREF0975_01646 | Hypothetical protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.978 |
EHM93203.1 | EHM89738.1 | HMPREF0975_02006 | HMPREF0975_02931 | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.527 |
EHM93203.1 | EHM90033.1 | HMPREF0975_02006 | HMPREF0975_02897 | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.507 |
EHM93203.1 | EHM90622.1 | HMPREF0975_02006 | HMPREF0975_02746 | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | Hypothetical protein. | 0.852 |
EHM93203.1 | EHM93257.1 | HMPREF0975_02006 | HMPREF0975_01994 | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.785 |
EHM93203.1 | EHM93262.1 | HMPREF0975_02006 | HMPREF0975_01999 | Hypothetical protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.982 |
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