STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM95039.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
EHM95040.1
Hypothetical protein.
 
    0.905
EHM95292.1
Hypothetical protein.
   
    0.672
EHM91564.1
Hypothetical protein.
 
 
 0.652
EHM93590.1
Hypothetical protein.
  
 
  0.497
EHM95300.1
Hypothetical protein.
  
    0.485
EHM93739.1
Hypothetical protein.
  
 
 0.481
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.458
EHM93741.1
Hypothetical protein.
 
    0.439
EHM95229.1
Hypothetical protein.
  
 
  0.423
EHM91158.1
Hypothetical protein.
  
 
  0.423
Your Current Organism:
Actinomyces sp. F0330
NCBI taxonomy Id: 653386
Other names: A. sp. oral taxon 849 str. F0330, Actinomyces sp. oral taxon 849 str. F0330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.