Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHM94921.1Hypothetical protein. (572 aa)    
Predicted Functional Partners:
EHM94922.1
Hypothetical protein.
 
    
0.855
EHM94923.1
histidyl-tRNA synthetase.
 
     0.816
EHM93732.1
Hypothetical protein.
  
  
 0.630
EHM93736.1
Hypothetical protein.
  
  
 0.630
EHM93583.1
Hypothetical protein.
  
     0.569
EHM94924.1
Hypothetical protein.
       0.561
EHM95840.1
Hypothetical protein.
  
     0.547
EHM94920.1
Hypothetical protein.
       0.541
EHM95452.1
Hypothetical protein.
  
     0.496
EHM90196.1
Hypothetical protein.
  
     0.478
Your Current Organism:
Actinomyces sp. F0330
NCBI taxonomy Id: 653386
Other names: A. sp. oral taxon 849 str. F0330, Actinomyces sp. oral taxon 849 str. F0330
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