Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHM90975.1 | EHM94778.1 | HMPREF0975_02612 | HMPREF0975_01143 | Hypothetical protein. | Aspartate ammonia-lyase. | 0.890 |
EHM90975.1 | EHM95506.1 | HMPREF0975_02612 | HMPREF0975_00436 | Hypothetical protein. | Hypothetical protein. | 0.936 |
EHM90975.1 | argH | HMPREF0975_02612 | HMPREF0975_00006 | Hypothetical protein. | Argininosuccinate lyase. | 0.906 |
EHM90975.1 | mdh | HMPREF0975_02612 | HMPREF0975_00384 | Hypothetical protein. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.909 |
EHM90975.1 | purA | HMPREF0975_02612 | HMPREF0975_02408 | Hypothetical protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.998 |
EHM91518.1 | EHM94656.1 | HMPREF0975_02474 | HMPREF0975_01235 | Hypothetical protein. | Aspartate aminotransferase. | 0.901 |
EHM91518.1 | EHM94778.1 | HMPREF0975_02474 | HMPREF0975_01143 | Hypothetical protein. | Aspartate ammonia-lyase. | 0.953 |
EHM91518.1 | argG | HMPREF0975_02474 | HMPREF0975_00008 | Hypothetical protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.895 |
EHM91518.1 | panD | HMPREF0975_02474 | HMPREF0975_02831 | Hypothetical protein. | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.906 |
EHM92576.1 | EHM94656.1 | HMPREF0975_02198 | HMPREF0975_01235 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Aspartate aminotransferase. | 0.859 |
EHM92576.1 | EHM94778.1 | HMPREF0975_02198 | HMPREF0975_01143 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Aspartate ammonia-lyase. | 0.854 |
EHM92576.1 | EHM95506.1 | HMPREF0975_02198 | HMPREF0975_00436 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Hypothetical protein. | 0.999 |
EHM92576.1 | argH | HMPREF0975_02198 | HMPREF0975_00006 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Argininosuccinate lyase. | 0.845 |
EHM92576.1 | mdh | HMPREF0975_02198 | HMPREF0975_00384 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.992 |
EHM94656.1 | EHM91518.1 | HMPREF0975_01235 | HMPREF0975_02474 | Aspartate aminotransferase. | Hypothetical protein. | 0.901 |
EHM94656.1 | EHM92576.1 | HMPREF0975_01235 | HMPREF0975_02198 | Aspartate aminotransferase. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.859 |
EHM94656.1 | EHM94778.1 | HMPREF0975_01235 | HMPREF0975_01143 | Aspartate aminotransferase. | Aspartate ammonia-lyase. | 0.947 |
EHM94656.1 | EHM95506.1 | HMPREF0975_01235 | HMPREF0975_00436 | Aspartate aminotransferase. | Hypothetical protein. | 0.918 |
EHM94656.1 | argG | HMPREF0975_01235 | HMPREF0975_00008 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.909 |
EHM94656.1 | mdh | HMPREF0975_01235 | HMPREF0975_00384 | Aspartate aminotransferase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.903 |
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