Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHM92576.1 | EHM94432.1 | HMPREF0975_02198 | HMPREF0975_01539 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Hypothetical protein. | 0.883 |
EHM92576.1 | EHM94656.1 | HMPREF0975_02198 | HMPREF0975_01235 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Aspartate aminotransferase. | 0.859 |
EHM92576.1 | EHM94776.1 | HMPREF0975_02198 | HMPREF0975_01141 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.533 |
EHM92576.1 | EHM94956.1 | HMPREF0975_02198 | HMPREF0975_01069 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Formate acetyltransferase. | 0.761 |
EHM92576.1 | EHM94994.1 | HMPREF0975_02198 | HMPREF0975_00862 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.424 |
EHM92576.1 | ldh | HMPREF0975_02198 | HMPREF0975_01655 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.984 |
EHM92576.1 | leuA | HMPREF0975_02198 | HMPREF0975_01925 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.589 |
EHM92576.1 | mdh | HMPREF0975_02198 | HMPREF0975_00384 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.992 |
EHM92576.1 | pgi | HMPREF0975_02198 | HMPREF0975_00910 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.502 |
EHM94432.1 | EHM92576.1 | HMPREF0975_01539 | HMPREF0975_02198 | Hypothetical protein. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.883 |
EHM94432.1 | EHM94656.1 | HMPREF0975_01539 | HMPREF0975_01235 | Hypothetical protein. | Aspartate aminotransferase. | 0.411 |
EHM94432.1 | EHM94720.1 | HMPREF0975_01539 | HMPREF0975_01213 | Hypothetical protein. | Transketolase; Belongs to the transketolase family. | 0.509 |
EHM94432.1 | EHM94776.1 | HMPREF0975_01539 | HMPREF0975_01141 | Hypothetical protein. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.912 |
EHM94432.1 | EHM94956.1 | HMPREF0975_01539 | HMPREF0975_01069 | Hypothetical protein. | Formate acetyltransferase. | 0.906 |
EHM94432.1 | EHM94994.1 | HMPREF0975_01539 | HMPREF0975_00862 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.957 |
EHM94432.1 | ldh | HMPREF0975_01539 | HMPREF0975_01655 | Hypothetical protein. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.923 |
EHM94432.1 | leuA | HMPREF0975_01539 | HMPREF0975_01925 | Hypothetical protein. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.898 |
EHM94432.1 | mdh | HMPREF0975_01539 | HMPREF0975_00384 | Hypothetical protein. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.956 |
EHM94656.1 | EHM92576.1 | HMPREF0975_01235 | HMPREF0975_02198 | Aspartate aminotransferase. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.859 |
EHM94656.1 | EHM94432.1 | HMPREF0975_01235 | HMPREF0975_01539 | Aspartate aminotransferase. | Hypothetical protein. | 0.411 |
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