Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHM93163.1Hypothetical protein. (636 aa)    
Predicted Functional Partners:
EHM93164.1
Hypothetical protein.
 
     0.946
EHM93162.1
Hypothetical protein.
 
     0.853
EHM93166.1
Hypothetical protein.
 
   
 0.678
EHM93167.1
Hypothetical protein.
 
   
 0.620
EHM90968.1
Hypothetical protein.
  
     0.606
EHM90540.1
Hypothetical protein.
  
     0.581
EHM93165.1
Hypothetical protein.
       0.570
EHM91233.1
Hypothetical protein.
  
     0.531
EHM90619.1
Hypothetical protein.
 
     0.529
EHM87164.1
Hypothetical protein.
  
     0.521
Your Current Organism:
Actinomyces sp. F0330
NCBI taxonomy Id: 653386
Other names: A. sp. oral taxon 849 str. F0330, Actinomyces sp. oral taxon 849 str. F0330
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