Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHM92408.1Hypothetical protein; Belongs to the peptidase S8 family. (436 aa)    
Predicted Functional Partners:
EHM94376.1
Hypothetical protein; Belongs to the peptidase S8 family.
  
 
 
0.864
EHM92407.1
Hypothetical protein.
       0.773
EHM92405.1
Hypothetical protein.
   
   0.702
EHM92406.1
Hypothetical protein.
  
    0.684
EHM92402.1
Hypothetical protein.
       0.682
EHM92403.1
Hypothetical protein.
       0.682
EHM92404.1
Hypothetical protein.
       0.682
EHM94750.1
Hypothetical protein.
  
 
 0.674
EHM94426.1
Hypothetical protein.
  
 
 0.674
EHM90201.1
Hypothetical protein.
  
 
 0.674
Your Current Organism:
Actinomyces sp. F0330
NCBI taxonomy Id: 653386
Other names: A. sp. oral taxon 849 str. F0330, Actinomyces sp. oral taxon 849 str. F0330
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