STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_054980SpoU_methylase domain-containing protein. (1536 aa)    
Predicted Functional Partners:
BN9_000690
Uncharacterized protein.
   
    0.820
BN9_091970
Uncharacterized protein.
   
    0.804
BN9_126120
Uncharacterized protein.
  
    0.802
BN9_015570
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.768
BN9_093560
Uncharacterized protein.
   
    0.754
BN9_133430
Uncharacterized protein.
   
    0.740
BN9_134580
Uncharacterized protein.
   
    0.740
BN9_081990
WD_REPEATS_REGION domain-containing protein.
   
    0.740
BN9_082000
WD_REPEATS_REGION domain-containing protein.
   
    0.740
BN9_110750
Uncharacterized protein.
   
  
 0.738
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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