Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN9_074890PHD-type domain-containing protein. (576 aa)    
Predicted Functional Partners:
BN9_072990
WD_REPEATS_REGION domain-containing protein.
   
 0.751
BN9_037410
DOT1 domain-containing protein.
    
 0.723
BN9_055820
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.723
BN9_040120
Tr-type G domain-containing protein.
    
  0.689
BN9_113200
WD_REPEATS_REGION domain-containing protein.
    
 0.673
BN9_010980
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.673
BN9_128690
Uncharacterized protein.
     
 0.655
BN9_054030
Uncharacterized protein.
     
 0.655
BN9_036020
Uncharacterized protein.
     
 0.650
BN9_034170
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
  0.643
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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