BN9_117880 protein (Albugo candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

BN9_117880

Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1375 aa)

Predicted Functional Partners:

BN9_020170

0.713

BN9_033610

0.711

BN9_108060

0.653

BN9_008930

0.645

BN9_030490

0.640

BN9_066360

0.640

BN9_041340

0.614

BN9_058510

0.612

BN9_028860

0.611

BN9_000150

0.603

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_000150	BN9_008930	A0A024FY36	A0A024FZS9	Uncharacterized protein.	Uncharacterized protein.	0.494
BN9_000150	BN9_030490	A0A024FY36	A0A024G5X4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.673
BN9_000150	BN9_033610	A0A024FY36	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.695
BN9_000150	BN9_066360	A0A024FY36	A0A024GGA4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.440
BN9_000150	BN9_117880	A0A024FY36	A0A024FUI8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.603
BN9_008930	BN9_000150	A0A024FZS9	A0A024FY36	Uncharacterized protein.	Uncharacterized protein.	0.494
BN9_008930	BN9_030490	A0A024FZS9	A0A024G5X4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.516
BN9_008930	BN9_033610	A0A024FZS9	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.689
BN9_008930	BN9_041340	A0A024FZS9	A0A024G9Z5	Uncharacterized protein.	Uncharacterized protein.	0.403
BN9_008930	BN9_066360	A0A024FZS9	A0A024GGA4	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.516
BN9_008930	BN9_117880	A0A024FZS9	A0A024FUI8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.645
BN9_020170	BN9_033610	A0A024G300	A0A024G8C1	Sec8_exocyst domain-containing protein.	Uncharacterized protein.	0.402
BN9_020170	BN9_041340	A0A024G300	A0A024G9Z5	Sec8_exocyst domain-containing protein.	Uncharacterized protein.	0.996
BN9_020170	BN9_108060	A0A024G300	A0A024GRZ5	Sec8_exocyst domain-containing protein.	Uncharacterized protein.	0.993
BN9_020170	BN9_117880	A0A024G300	A0A024FUI8	Sec8_exocyst domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.713
BN9_028860	BN9_033610	A0A024G5R3	A0A024G8C1	Uncharacterized protein.	Uncharacterized protein.	0.495
BN9_028860	BN9_117880	A0A024G5R3	A0A024FUI8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.611
BN9_030490	BN9_000150	A0A024G5X4	A0A024FY36	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.673
BN9_030490	BN9_008930	A0A024G5X4	A0A024FZS9	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.516
BN9_030490	BN9_033610	A0A024G5X4	A0A024G8C1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.784