BN9_118230 protein (Albugo candida) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

BN9_118230

UDENN domain-containing protein. (789 aa)

Predicted Functional Partners:

BN9_023690

0.562

BN9_052710

0.562

BN9_050060

0.562

BN9_054330

0.562

BN9_059510

0.562

BN9_072520

0.562

BN9_071410

0.562

BN9_072530

0.562

BN9_093670

0.562

BN9_099510

0.562

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_023690	BN9_099510	A0A024G5J1	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_023690	BN9_118230	A0A024G5J1	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562
BN9_050060	BN9_099510	A0A024GD09	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_050060	BN9_118230	A0A024GD09	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562
BN9_052710	BN9_099510	A0A024GCR9	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_052710	BN9_118230	A0A024GCR9	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562
BN9_054330	BN9_059510	A0A024GDK5	A0A024GEI6	Uncharacterized protein.	Uncharacterized protein.	0.418
BN9_054330	BN9_099510	A0A024GDK5	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_054330	BN9_118230	A0A024GDK5	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562
BN9_059510	BN9_054330	A0A024GEI6	A0A024GDK5	Uncharacterized protein.	Uncharacterized protein.	0.418
BN9_059510	BN9_099510	A0A024GEI6	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_059510	BN9_118230	A0A024GEI6	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562
BN9_071410	BN9_099510	A0A024GI55	A0A024GPD7	Ion_trans domain-containing protein.	Uncharacterized protein.	0.753
BN9_071410	BN9_118230	A0A024GI55	A0A024FUN9	Ion_trans domain-containing protein.	UDENN domain-containing protein.	0.562
BN9_072520	BN9_099510	A0A024GHF3	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_072520	BN9_118230	A0A024GHF3	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562
BN9_072530	BN9_099510	A0A024GJ05	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_072530	BN9_118230	A0A024GJ05	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562
BN9_093670	BN9_099510	A0A024GNH7	A0A024GPD7	Uncharacterized protein.	Uncharacterized protein.	0.753
BN9_093670	BN9_118230	A0A024GNH7	A0A024FUN9	Uncharacterized protein.	UDENN domain-containing protein.	0.562