Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN9_123710Uncharacterized protein. (231 aa)    
Predicted Functional Partners:
BN9_068960
RRM domain-containing protein.
   
 0.891
BN9_108040
RRM domain-containing protein.
   
 0.891
BN9_077360
Uncharacterized protein.
   
 0.878
BN9_110940
RRM domain-containing protein.
   
 0.866
BN9_012560
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.865
BN9_005660
MPN domain-containing protein.
   
 
 0.860
BN9_030940
SF3b1 domain-containing protein.
   
 0.860
BN9_119180
Uncharacterized protein.
   
 0.859
BN9_119170
Uncharacterized protein.
   
 0.859
BN9_042460
Uncharacterized protein.
    
 0.856
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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