STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_002840Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (188 aa)    
Predicted Functional Partners:
BN9_080870
PUM-HD domain-containing protein.
    
   0.532
BN9_039840
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
    0.512
BN9_031510
RRM Nup35-type domain-containing protein.
    
   0.474
BN9_060200
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.455
BN9_099570
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 
 0.452
BN9_098620
Prohibitin.
    
 
 0.448
BN9_098630
Prohibitin.
    
 
 0.448
BN9_010680
Mitochondrial inner membrane protease subunit.
    
 
 0.429
BN9_095180
zf-Tim10_DDP domain-containing protein.
   
 
 0.420
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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