STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_008680DUF3677 domain-containing protein. (2405 aa)    
Predicted Functional Partners:
BN9_001500
Uncharacterized protein.
    
 0.961
BN9_038750
Uncharacterized protein.
    
 0.961
BN9_100370
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.946
BN9_087320
Uncharacterized protein.
   
 0.930
BN9_087330
Uncharacterized protein.
   
 0.930
BN9_061820
Uncharacterized protein.
    
 0.913
BN9_061840
Lactamase_B domain-containing protein.
    
 0.913
BN9_061850
Uncharacterized protein.
    
 0.913
BN9_061860
Lactamase_B domain-containing protein.
    
 0.913
BN9_061830
Beta-Casp domain-containing protein.
    
 0.913
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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