STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_007900Uncharacterized protein. (2323 aa)    
Predicted Functional Partners:
BN9_019270
Protein kinase domain-containing protein.
    
 
 0.944
BN9_043550
eRF1_1 domain-containing protein.
    
   0.584
BN9_015100
Uncharacterized protein.
    
 
 0.551
BN9_070560
Uncharacterized protein.
    
 
 0.551
BN9_012110
Protein kinase domain-containing protein.
    
 
 0.455
BN9_012090
Protein kinase domain-containing protein.
    
 
 0.455
BN9_012100
Protein kinase domain-containing protein.
    
 
 0.455
BN9_104980
Protein kinase domain-containing protein.
    
 
 0.455
BN9_125530
Uncharacterized protein.
    
   0.434
BN9_125750
RNB domain-containing protein.
    
   0.434
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.