BN9_024200 protein (Albugo candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BN9_024200

Protein kinase domain-containing protein. (517 aa)

Predicted Functional Partners:

BN9_067420

0.878

BN9_048400

0.663

BN9_085520

0.656

BN9_060060

0.655

BN9_029050

0.621

BN9_052640

0.621

BN9_087090

0.621

BN9_040060

0.620

BN9_072700

0.549

BN9_083970

0.549

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_024200	BN9_029050	A0A024G4E2	A0A024G720	Protein kinase domain-containing protein.	Uncharacterized protein.	0.621
BN9_024200	BN9_040060	A0A024G4E2	A0A024GA60	Protein kinase domain-containing protein.	Uncharacterized protein.	0.620
BN9_024200	BN9_048400	A0A024G4E2	A0A024GB14	Protein kinase domain-containing protein.	Uncharacterized protein.	0.663
BN9_024200	BN9_052640	A0A024G4E2	A0A024GDQ7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.621
BN9_024200	BN9_060060	A0A024G4E2	A0A024GED8	Protein kinase domain-containing protein.	FHA domain-containing protein.	0.655
BN9_024200	BN9_067420	A0A024G4E2	A0A024GG31	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.878
BN9_024200	BN9_072700	A0A024G4E2	A0A024GHZ8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.549
BN9_024200	BN9_083970	A0A024G4E2	A0A024GLM7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.549
BN9_024200	BN9_085520	A0A024G4E2	A0A024GLF0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.656
BN9_024200	BN9_087090	A0A024G4E2	A0A024GLD2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.621
BN9_029050	BN9_024200	A0A024G720	A0A024G4E2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.621
BN9_029050	BN9_048400	A0A024G720	A0A024GB14	Uncharacterized protein.	Uncharacterized protein.	0.894
BN9_029050	BN9_060060	A0A024G720	A0A024GED8	Uncharacterized protein.	FHA domain-containing protein.	0.738
BN9_029050	BN9_067420	A0A024G720	A0A024GG31	Uncharacterized protein.	Protein kinase domain-containing protein.	0.925
BN9_029050	BN9_072700	A0A024G720	A0A024GHZ8	Uncharacterized protein.	Uncharacterized protein.	0.935
BN9_029050	BN9_083970	A0A024G720	A0A024GLM7	Uncharacterized protein.	Uncharacterized protein.	0.851
BN9_029050	BN9_085520	A0A024G720	A0A024GLF0	Uncharacterized protein.	Uncharacterized protein.	0.725
BN9_029050	BN9_087090	A0A024G720	A0A024GLD2	Uncharacterized protein.	Uncharacterized protein.	0.838
BN9_040060	BN9_024200	A0A024GA60	A0A024G4E2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.620
BN9_040060	BN9_048400	A0A024GA60	A0A024GB14	Uncharacterized protein.	Uncharacterized protein.	0.859