BN9_039530 protein (Albugo candida) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

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[Homology]

Score

BN9_039530

Uncharacterized protein. (561 aa)

Predicted Functional Partners:

BN9_063710

0.915

BN9_098620

0.705

BN9_098630

0.705

BN9_111420

0.672

BN9_122790

0.672

BN9_054340

0.672

BN9_065630

0.672

BN9_067150

0.672

BN9_077510

0.672

BN9_019400

0.615

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_019400	BN9_039530	A0A024G3B1	A0A024G920	Uncharacterized protein.	Uncharacterized protein.	0.615
BN9_019400	BN9_054340	A0A024G3B1	A0A024GCN5	Uncharacterized protein.	RWP-RK domain-containing protein.	0.478
BN9_019400	BN9_065630	A0A024G3B1	A0A024GFK6	Uncharacterized protein.	RWP-RK domain-containing protein.	0.478
BN9_019400	BN9_067150	A0A024G3B1	A0A024GH01	Uncharacterized protein.	RWP-RK domain-containing protein.	0.478
BN9_019400	BN9_077510	A0A024G3B1	A0A024GJA1	Uncharacterized protein.	RWP-RK domain-containing protein.	0.478
BN9_019400	BN9_111420	A0A024G3B1	A0A024FU44	Uncharacterized protein.	Uncharacterized protein.	0.478
BN9_019400	BN9_122790	A0A024G3B1	A0A024FVY3	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.478
BN9_039530	BN9_019400	A0A024G920	A0A024G3B1	Uncharacterized protein.	Uncharacterized protein.	0.615
BN9_039530	BN9_054340	A0A024G920	A0A024GCN5	Uncharacterized protein.	RWP-RK domain-containing protein.	0.672
BN9_039530	BN9_063710	A0A024G920	A0A024GF36	Uncharacterized protein.	Uncharacterized protein.	0.915
BN9_039530	BN9_065630	A0A024G920	A0A024GFK6	Uncharacterized protein.	RWP-RK domain-containing protein.	0.672
BN9_039530	BN9_067150	A0A024G920	A0A024GH01	Uncharacterized protein.	RWP-RK domain-containing protein.	0.672
BN9_039530	BN9_077510	A0A024G920	A0A024GJA1	Uncharacterized protein.	RWP-RK domain-containing protein.	0.672
BN9_039530	BN9_098620	A0A024G920	A0A024GPF3	Uncharacterized protein.	Prohibitin.	0.705
BN9_039530	BN9_098630	A0A024G920	A0A024GPK8	Uncharacterized protein.	Prohibitin.	0.705
BN9_039530	BN9_111420	A0A024G920	A0A024FU44	Uncharacterized protein.	Uncharacterized protein.	0.672
BN9_039530	BN9_122790	A0A024G920	A0A024FVY3	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.672
BN9_054340	BN9_019400	A0A024GCN5	A0A024G3B1	RWP-RK domain-containing protein.	Uncharacterized protein.	0.478
BN9_054340	BN9_039530	A0A024GCN5	A0A024G920	RWP-RK domain-containing protein.	Uncharacterized protein.	0.672
BN9_063710	BN9_039530	A0A024GF36	A0A024G920	Uncharacterized protein.	Uncharacterized protein.	0.915