STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_039710Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
BN9_124300
Uncharacterized protein.
    
  0.742
BN9_110940
RRM domain-containing protein.
   
  0.736
BN9_125580
Slu7 domain-containing protein.
   
 
  0.736
BN9_059530
Smg4_UPF3 domain-containing protein.
   
  0.724
BN9_059520
Smg4_UPF3 domain-containing protein.
   
  0.724
BN9_004280
Uncharacterized protein.
    
  0.721
BN9_004480
Nkap_C domain-containing protein.
   
 
  0.718
BN9_016350
MI domain-containing protein.
    
  0.705
BN9_110890
Uncharacterized protein.
   
 
  0.693
BN9_037140
Cir_N domain-containing protein.
   
 
  0.687
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.