BN9_053760 protein (Albugo candida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

BN9_053760

Uncharacterized protein. (750 aa)

Predicted Functional Partners:

BN9_048910

0.827

BN9_100660

0.825

BN9_056820

0.804

BN9_056810

0.804

BN9_043270

0.735

BN9_045510

0.735

BN9_029370

0.723

BN9_085780

0.723

BN9_096330

0.697

BN9_019000

0.665

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_019000	BN9_053760	A0A024G375	A0A024GD04	Uncharacterized protein.	Uncharacterized protein.	0.665
BN9_019000	BN9_056810	A0A024G375	A0A024GEV0	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.660
BN9_019000	BN9_056820	A0A024G375	A0A024GDL7	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.660
BN9_019000	BN9_096330	A0A024G375	A0A024GPQ3	Uncharacterized protein.	HORMA domain-containing protein.	0.969
BN9_029370	BN9_043270	A0A024G658	A0A024G9V9	AMP-binding domain-containing protein.	Uncharacterized protein.	0.881
BN9_029370	BN9_045510	A0A024G658	A0A024GBQ3	AMP-binding domain-containing protein.	BTB domain-containing protein.	0.881
BN9_029370	BN9_048910	A0A024G658	A0A024GCP7	AMP-binding domain-containing protein.	Uncharacterized protein.	0.958
BN9_029370	BN9_053760	A0A024G658	A0A024GD04	AMP-binding domain-containing protein.	Uncharacterized protein.	0.723
BN9_029370	BN9_100660	A0A024G658	A0A024GPQ2	AMP-binding domain-containing protein.	Uncharacterized protein.	0.959
BN9_043270	BN9_029370	A0A024G9V9	A0A024G658	Uncharacterized protein.	AMP-binding domain-containing protein.	0.881
BN9_043270	BN9_048910	A0A024G9V9	A0A024GCP7	Uncharacterized protein.	Uncharacterized protein.	0.969
BN9_043270	BN9_053760	A0A024G9V9	A0A024GD04	Uncharacterized protein.	Uncharacterized protein.	0.735
BN9_043270	BN9_085780	A0A024G9V9	A0A024GM19	Uncharacterized protein.	Uncharacterized protein.	0.954
BN9_043270	BN9_100660	A0A024G9V9	A0A024GPQ2	Uncharacterized protein.	Uncharacterized protein.	0.984
BN9_045510	BN9_029370	A0A024GBQ3	A0A024G658	BTB domain-containing protein.	AMP-binding domain-containing protein.	0.881
BN9_045510	BN9_048910	A0A024GBQ3	A0A024GCP7	BTB domain-containing protein.	Uncharacterized protein.	0.915
BN9_045510	BN9_053760	A0A024GBQ3	A0A024GD04	BTB domain-containing protein.	Uncharacterized protein.	0.735
BN9_045510	BN9_085780	A0A024GBQ3	A0A024GM19	BTB domain-containing protein.	Uncharacterized protein.	0.881
BN9_045510	BN9_100660	A0A024GBQ3	A0A024GPQ2	BTB domain-containing protein.	Uncharacterized protein.	0.953
BN9_048910	BN9_029370	A0A024GCP7	A0A024G658	Uncharacterized protein.	AMP-binding domain-containing protein.	0.958