BN9_051960 protein (Albugo candida) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Neighborhood

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Experiments

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[Homology]

Score

BN9_051960

Uncharacterized protein. (331 aa)

Predicted Functional Partners:

BN9_019010

0.685

BN9_072680

0.685

BN9_118100

0.685

BN9_131480

0.671

BN9_095630

0.621

BN9_098580

0.621

BN9_014180

0.617

BN9_127520

0.617

BN9_034410

0.607

BN9_063910

0.595

Your Current Organism:

Albugo candida

NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN9_014180	BN9_019010	A0A024G1I2	A0A024G3H3	Uncharacterized protein.	Uncharacterized protein.	0.706
BN9_014180	BN9_034410	A0A024G1I2	A0A024G8K1	Uncharacterized protein.	Uncharacterized protein.	0.427
BN9_014180	BN9_051960	A0A024G1I2	A0A024GD18	Uncharacterized protein.	Uncharacterized protein.	0.617
BN9_014180	BN9_072680	A0A024G1I2	A0A024GJ19	Uncharacterized protein.	HATPase_c domain-containing protein.	0.706
BN9_014180	BN9_095630	A0A024G1I2	A0A024GPK1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.908
BN9_014180	BN9_098580	A0A024G1I2	A0A024GPK4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.908
BN9_014180	BN9_118100	A0A024G1I2	A0A024GUE0	Uncharacterized protein.	HATPase_c domain-containing protein.	0.706
BN9_019010	BN9_014180	A0A024G3H3	A0A024G1I2	Uncharacterized protein.	Uncharacterized protein.	0.706
BN9_019010	BN9_034410	A0A024G3H3	A0A024G8K1	Uncharacterized protein.	Uncharacterized protein.	0.905
BN9_019010	BN9_051960	A0A024G3H3	A0A024GD18	Uncharacterized protein.	Uncharacterized protein.	0.685
BN9_019010	BN9_095630	A0A024G3H3	A0A024GPK1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.737
BN9_019010	BN9_098580	A0A024G3H3	A0A024GPK4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.737
BN9_019010	BN9_127520	A0A024G3H3	A0A024GVJ9	Uncharacterized protein.	Uncharacterized protein.	0.706
BN9_019010	BN9_131480	A0A024G3H3	A0A024GVT0	Uncharacterized protein.	CS domain-containing protein.	0.980
BN9_034410	BN9_014180	A0A024G8K1	A0A024G1I2	Uncharacterized protein.	Uncharacterized protein.	0.427
BN9_034410	BN9_019010	A0A024G8K1	A0A024G3H3	Uncharacterized protein.	Uncharacterized protein.	0.905
BN9_034410	BN9_051960	A0A024G8K1	A0A024GD18	Uncharacterized protein.	Uncharacterized protein.	0.607
BN9_034410	BN9_072680	A0A024G8K1	A0A024GJ19	Uncharacterized protein.	HATPase_c domain-containing protein.	0.905
BN9_034410	BN9_095630	A0A024G8K1	A0A024GPK1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.589
BN9_034410	BN9_098580	A0A024G8K1	A0A024GPK4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.589