STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_054010IFRD domain-containing protein. (354 aa)    
Predicted Functional Partners:
BN9_000060
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.906
BN9_076840
Uncharacterized protein.
    
 0.884
BN9_123020
COMM domain-containing protein.
    
 0.878
BN9_093000
Uncharacterized protein.
    
 0.862
BN9_095630
Ubiquitin-like domain-containing protein.
    
  0.858
BN9_098580
Ubiquitin-like domain-containing protein.
    
  0.858
BN9_080770
PI3K/PI4K domain-containing protein.
    
  0.855
BN9_042880
COMM domain-containing protein.
    
 0.802
BN9_021070
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.796
BN9_050660
Ubiquitin-like domain-containing protein.
    
  0.796
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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