Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN9_052110Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (850 aa)    
Predicted Functional Partners:
BN9_107090
cobW domain-containing protein.
 
  
 0.893
BN9_026730
Arginase; Belongs to the arginase family.
     
 0.861
BN9_032720
Robl_LC7 domain-containing protein.
   
 0.812
BN9_034560
Dynein light chain roadblock.
   
 0.812
BN9_047710
Robl_LC7 domain-containing protein.
   
 0.812
BN9_011410
WD_REPEATS_REGION domain-containing protein.
    
 0.794
BN9_034410
Uncharacterized protein.
    
  0.790
BN9_063950
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.789
BN9_076580
Uncharacterized protein; Belongs to the tubulin family.
    
 0.789
BN9_019370
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.781
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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